AIRR R Reference Library#
airr
is an R package for working with data formatted according to
the AIRR Standards schemas. It includes the full set of schema
definitions along with simple functions for read, write and validation.
Table of Contents
Download & Installation#
To install the latest release from CRAN:
install.packages("airr")
To build from the source code, first install the build dependencies:
install.packages(c("devtools", "roxygen2"))
To install the latest development code via devtools:
library(devtools)
install_github("airr-community/airr-standards/lang/R@master")
Note, using install_github
will not build the documentation. To generate the
documentation, clone the repository, and then build as normal using the following
R commands from the package root lang/R
:
library(devtools)
install_deps(dependencies=T)
document()
install()
Dependencies#
Depends: FALSE
Imports: jsonlite, methods, readr, stats, stringi, tools, yaml
Suggests: knitr, rmarkdown, tibble, testthat
License#
CC BY 4.0