AIRR Software WG - List of Tools Certified as Compliant

AIRR Software WG - List of Tools Certified as CompliantΒΆ

The following tools have been certified as compliant with v1.0 of the guidelines:

Software

Version

Support

Reference

SONAR

3

Output

Schramm et al. Front Immunol, 2016.

ImmuneDB

0.29.10

Input

Rosenfeld et al. Front Immunol, 2018,

Scirpy

0.4.2

Input

Sturm et al. Bioinformatics, 2020,

Immcantation Framework

4

Input, Output

Vander Heiden et al. Bioinformatics, 2014,; Gupta et al., Bioinformatics, 2015,

CompAIRR

1.3.1

Input

Rognes T, Scheffer L, Greiff V, Sandve GK, BioRxiv, 2021 (preprint),

ImmuneML

2.0.4

Input, Output

Pavlovic et al., BioRxiv, 2021 (preprint),

Dandelion

0.1.10

Output

Stephenson et al., Nature Medicine, 2021,