AIRR Software WG - List of Tools Certified as Compliant

The following tools have been certified as compliant with v1.0 of the guidelines:

Software	Version	Support	Reference
SONAR	3	Output	Schramm et al. Front Immunol, 2016.
ImmuneDB	0.29.10	Input	Rosenfeld et al. Front Immunol, 2018,
Scirpy	0.4.2	Input	Sturm et al. Bioinformatics, 2020,
Immcantation Framework	4	Input, Output	Vander Heiden et al. Bioinformatics, 2014,; Gupta et al., Bioinformatics, 2015,
CompAIRR	1.3.1	Input	Rognes T, Scheffer L, Greiff V, Sandve GK, BioRxiv, 2021 (preprint),
ImmuneML	2.0.4	Input, Output	Pavlovic et al., BioRxiv, 2021 (preprint),
Dandelion	0.1.10	Output	Suo, C., Polanski, K., Dann, E. et al., Nature Biotechnology, 2023,
TRUST4	1.0.8	Output	Song, L., Cohen, D., Ouyang, Z. et al., Nature Methods, 2021,
partis	0.16.0	Input, Output	Ralph D and Matsen F IV, PLOS Computational Biology, 2022,
nf-core/airrflow	3.2.0	Input, Output	Gisela Gabernet, Susanna Marquez, Alexander Peltzer, et al, 2023,
AnalyzAIRR	1.1.0	Input	V. Mhanna, G. Pires, G. Bohl, et al., AnalyzAIRR,