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Getting Started
AIRR Rearrangement TSV Interoperability Example
ADC API Query and Analysis Example
Scientific Query Scenarios for AIRR Data Commons API
Release Notes
AIRR Standards
Study Reporting (MiAIRR)
MiAIRR Data Elements
National Center for Biotechnology Information (NCBI) Submission
Guide for submission of AIRR-seq data to NCBI
MiAIRR-to-NCBI Submission Manual
MiAIRR-to-NCBI Specification
Requirement levels of fields
Metadata annotation guidelines
Data Model
Requirement levels of fields
Repertoire Schema
Rearrangement Schema
Alignment Schema (Experimental)
Clone and Lineage Tree Schema (Experimental)
Cell Schema (Experimental)
Cell Expression Schema (Experimental)
Cell Reactivity Schema (Experimental)
Germline Schema (Experimental)
Receptor Schema
V(D)J Sequence Representation
Metadata Representation
Software Guidelines
Compliance Checklist for AIRR Software Tools
List of Compliant Tools
Recommended Software Evaluation Data Sets
Data Commons API
API Endpoints
Components of a Request
ADC API Limits and Thresholds
ADC API Reference Implementation
Asynchronous API
Ontologies and Vocabularies
Report Sprint 11/2018
Report Sprint 04/2020
Report Sprint 04/2021
Schema Release Notes
Data Submission and Query
MiAIRR to NCBI submission guide
Guide for submission of AIRR-seq data to NCBI
MiAIRR-to-NCBI Submission Manual
MiAIRR-to-NCBI Specification
CEDAR's CAIRR submission pipeline
VDJServer Community Data Portal
iReceptor Turnkey Repository
OGRDB
The Genbank/ENA Workflow.
Software
Python Library
API Reference
Commandline Tools
Release Notes
R Library
Usage Vignette
Reference Manual
read_tabular
read_airr
write_tabular
write_airr
validate_tabular
validate_airr
load_schema
Schema-class
ExampleData
Release Notes
JavaScript Library
Release Notes
Applications Supporting the Rearrangement Schema
AIRR Data Commons Repositories
Community
Applications Supporting the Rearrangement Schema
AIRR Data Commons
AIRR Data Commons Repositories
Glossary
References
.rst
.pdf
JavaScript Library Release Notes
Contents
Version 2.0.0: DATE
JavaScript Library Release Notes
#
Version 2.0.0: DATE
#
Initial release.
Contents
Version 2.0.0: DATE
