Version 1.4.1: August 27, 2022#
Significant internal refactoring to improve schema generalizability, harmonize behavior between the python and R libraries, and prepare for AIRR Standards v2.0.
read_alignmentto allow explicit declaration of the type for fields that are not defined in the schema.
Data Model and Schema:
validate_airrfunctions that support AIRR Data Model files that store arrays of objects in JSON or YAML.
Added support for the AIRR Model Data File and associated schema (DataFile, Info). The Data File data format holds AIRR object of multiple types and is backwards compatible with Repertoire metadata.
Added support for the new germline and genotyping schema (GermlineSet, GenotypeSet) and associated schema.
Version 1.3.0: May 26, 2020#
Updated schema set to v1.3.
Schemaobject containing general schema information.
Version 1.2.0: August 17, 2018#
Updated schema set to v1.2.
Changed defaults to
base="1"for read and write functions.
Updated example TSV file with coordinate changes, addition of
germline_alignmentdata and simplification of
Version 1.1.0: May 1, 2018#