Cell Expression Schema (Experimental)#
File Format Specification#
The file format has not been specified yet.
Cell Expression Fields#
Name |
Type |
Attributes |
Definition |
---|---|---|---|
|
string |
required, identifier |
Identifier of this expression property measurement. |
|
string |
required |
Identifier of the cell to which this expression data is related. |
|
string |
required, nullable |
Identifier for the associated repertoire in study metadata. |
|
string |
required, nullable |
Identifier of the data processing object in the repertoire metadata for this clone. |
|
string |
required |
Keyword describing the property type and detection method used to measure the property value. The following keywords are recommended, but custom property types are also valid: “mrna_expression_by_read_count”, “protein_expression_by_fluorescence_intensity”, “antigen_bait_binding_by_fluorescence_intensity”, “protein_expression_by_dna_barcode_count” and “antigen_bait_binding_by_dna_barcode_count”. |
|
required, nullable |
Name of the property observed, typically a gene or antibody identifier (and label) from a canonical resource such as Ensembl (e.g. ENSG00000275747, IGHV3-79) or Antibody Registry (ABREG:1236456, Purified anti-mouse/rat/human CD27 antibody). |
|
|
number |
required, nullable |
Level at which the property was observed in the experiment (non-normalized). |