AIRR R Reference Library#
airr
is an R package for working with data formatted according to
the AIRR Standards schemas. It includes the full set of schema
definitions along with simple functions for read, write and validation.
Download & Installation#
To install the latest release from CRAN:
install.packages("airr")
To build from the source code, first install the build dependencies:
install.packages(c("devtools", "roxygen2"))
To install the latest development code via devtools:
library(devtools)
install_github("airr-community/airr-standards/lang/R@master")
Note, using install_github
will not build the documentation. To generate the
documentation, clone the repository, and then build as normal using the following
R commands from the package root lang/R
:
library(devtools)
install_deps(dependencies=T)
document()
install()
Dependencies#
Depends: FALSE
Imports: jsonlite, methods, readr, stats, stringi, tools, yaml
Suggests: knitr, rmarkdown, tibble, testthat
License#
CC BY 4.0